SubtiBank SubtiBank
Version comparison:

2017-05-17 11:12:482025-05-07 02:56:09

description

Putative polysaccharide deacetylase

putative polysaccharide deacetylase

locus

BSU09660

BSU_09660

geneLength

846

849

ec

outlinks

bsu

BSU09660

BSU_09660

Gene

Coordinates

1,040,861 → 1,041,709

1,040,861 1,041,709

Biological materials

Mutant

MGNA-A708 (yheN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/708 NBRP B. subtilis, Japan]

MGNA-A708 (yheN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/708 NBRP B. subtilis, Japan]

BKE09660 ([[gene|yheN]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAACAATCTCTCCATTGG, downstream forward: _UP4_TAAAAAAGTGAGGCGCATAA

BKK09660 ([[gene|yheN]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAACAATCTCTCCATTGG, downstream forward: _UP4_TAAAAAAGTGAGGCGCATAA

The protein

Protein family

[SW|polysaccharide deacetylase family] (according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

NodB homology domain (aa 85-271) (according to UniProt)

The protein

Structure

[PDB|2C1G] (the NodB domain, from Streptococcus pneumoniae, 37% identity) [pubmed|16221761]

References

Research papers

16221761